github Python re-analysis due

Hereon-InstituteMS/openPASO

openPASO (formerly OASiS): an MCP server that lets an AI model run nine finite-element and multiphysics codes, with curated knowledge, verified execution and cross-code coupling. Under active development; contributions welcome.

maintainer: Hereon-InstituteMS
licence: MIT
first seen: 2026-09-17
last seen: 2026-09-19
releases · 30d: 0
short id

Drift inferred · capture-to-capture

No drift recorded — single capability capture; advisories appear once its surface changes.

capabilities 58 tools

transport stdio counts 58 tools · 0 res · 0 prompts permission surface via code analysis

tools

audit_results
benchmark_poisson_cross_solver
benchmark_problem
browse_solver_tests
build_source
check_input
check_simulation_quality
compare_solvers
couple
couple_levels
couple_precice
coupled_solve
deep_validate
developer
discover
discover_sources
ensure_source
examples
fetch_source
generate_mesh
get_example_input
get_example_inputs
get_input_file_guide
get_input_schema
get_job_status
get_module_info
get_solver_architecture
get_solver_capabilities_matrix
get_solver_info
knowledge
list_jobs
list_solver_source_files
list_solvers
list_template_variants
list_tutorials
parameter_study
plot_all_fields
plot_result
post_process
prepare_simulation
query_documentation
read_solver_test_file
recommend_solver_for
rediscover_backends
reload_catalog
restart_simulation
run_simulation
run_with_generator
search_examples
session_insights
setup_backend
submit_critic_review
transfer_field
validate_physics
verify_interface_flux
verify_mesh_independence
verify_pde_consistency
visualize

skills & danger signals github-tarball

prompt-surface shipped agent-instruction files + hidden-content / dangerous-code findings — quoted from the analyzed source

analyzed commit 8bae1cf · analyzer v33 · 1d ago

skills & prompt files 3

agent-rules Hereon-InstituteMS-openPASO-8bae1cf/.cursorrules
agent-rules Hereon-InstituteMS-openPASO-8bae1cf/.github/copilot-instructions.md
agent-rules Hereon-InstituteMS-openPASO-8bae1cf/.windsurfrules

danger signals5

dynamic code execution eval()/exec() Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fsi_solid_fourc.py :206 v = eval(e.replace("^", "**"), {"__builtins__": {}},
dynamic code execution __import__() Hereon-InstituteMS-openPASO-8bae1cf/src/core/autodiscovery.py :59 mod = __import__(import_name)
dynamic code execution eval()/exec() Hereon-InstituteMS-openPASO-8bae1cf/src/core/residual_gate.py :126 value = eval(code, {"__builtins__": {}}, env) # noqa: S307
dynamic code execution __import__() Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :8728 mod = __import__(where[0], fromlist=[where[1]])
dynamic code execution eval()/exec() Hereon-InstituteMS-openPASO-8bae1cf/src/tools/pde_consistency.py :208 out = eval(expr, {"__builtins__": {}}, env) # noqa: S307

code evidence vv1.1.0 · github-tarball

evidence-backed findings quoted directly from the published source artifact — not inferred

code files: 322

filesystem 150

fs Hereon-InstituteMS-openPASO-8bae1cf/check_install.py :24 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/fsi_reference_newtonkrylov.py :38 import shutil
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dealii.py :31 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dealii_elastic.py :36 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dealii_transient.py :61 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dune.py :9 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dune_3d.py :113 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dune_elastic.py :79 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_febio.py :43 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_febio_elastic.py :327 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fenics.py :15 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fenics_elastic.py :36 from pathlib import Path

show 28 more

fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fenics_thermoelastic.py :38 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fenics_transient.py :246 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fourc.py :16 import shutil
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fourc_thermoelastic.py :24 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fsi_fluid_fenics.py :47 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fsi_solid_fenics.py :25 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fsi_solid_fourc.py :105 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fsi_solid_skfem.py :24 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_kratos.py :21 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_kratos_3d.py :130 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_kratos_neumann.py :54 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_ngsolve.py :10 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_ngsolve_elastic.py :34 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_skfem.py :10 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_skfem_elastic.py :52 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_sparta.py :49 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_tsi_mech_fenics.py :37 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_tsi_mech_ngsolve.py :42 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_tsi_mech_skfem.py :40 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_tsi_thermal_fenics.py :45 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_tsi_thermal_ngsolve.py :46 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_tsi_thermal_skfem.py :50 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/data/kratos_knowledge.py :1797 with open("ProjectParameters.json", 'r') as parameter_file:
fs (weak) Hereon-InstituteMS-openPASO-8bae1cf/docs/_gen_reference.py :18 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/langgraph_eval/agent.py :38 import shutil
fs Hereon-InstituteMS-openPASO-8bae1cf/run_agent.py :24 from pathlib import Path
fs Hereon-InstituteMS-openPASO-8bae1cf/src/backends/dealii/backend.py :18 import shutil
fs Hereon-InstituteMS-openPASO-8bae1cf/src/backends/dune/backend.py :15 import shutil

110 more not shown — this panel samples each group; the count above is the real total.

shell / exec 36

shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/fsi_reference_newtonkrylov.py :39 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dealii.py :29 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dealii_elastic.py :34 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_dealii_transient.py :59 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_febio.py :41 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_febio_elastic.py :325 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fourc.py :17 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fourc_thermoelastic.py :22 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_fsi_solid_fourc.py :102 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/data/coupling_participants/participant_sparta.py :47 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/langgraph_eval/agent.py :40 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/dealii/backend.py :297 import subprocess

show 24 more

shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/dune/backend.py :90 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/febio/backend.py :62 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/fenics/backend.py :83 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/fourc/backend.py :147 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/kratos/backend.py :72 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/kratos/generators/cosimulation.py :32 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/kratos/generators/shape_optimization.py :29 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/ngsolve/backend.py :58 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/skfem/backend.py :40 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/backends/sparta/backend.py :383 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/autodiscovery.py :24 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/backend_setup.py :35 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/coupling_driver.py :84 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/field_series.py :21 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/precice_config.py :471 import subprocess
shell (weak) Hereon-InstituteMS-openPASO-8bae1cf/src/core/smoke_tests.py :12 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/source_build.py :21 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/source_discovery.py :23 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/core/source_fetch.py :18 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :672 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/tools/fourc_deck_lint.py :17 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/tools/participant_lint.py :733 import subprocess # noqa: PLC0415
shell Hereon-InstituteMS-openPASO-8bae1cf/src/tools/simulation.py :64 import subprocess
shell Hereon-InstituteMS-openPASO-8bae1cf/src/tools/workspace_advisor.py :413 result = subprocess.run(cmd, cwd=work_dir, capture_output=True, ...)

secrets 2

secrets Hereon-InstituteMS-openPASO-8bae1cf/check_install.py :154 in_shell = bool(os.environ.get("OPENROUTER_API_KEY", "").strip())
secrets Hereon-InstituteMS-openPASO-8bae1cf/run_agent.py :258 api_key = os.environ.get("OPENROUTER_API_KEY", "").strip()

tool registrations 64

benchmark_problem Hereon-InstituteMS-openPASO-8bae1cf/src/tools/benchmark.py :21
benchmark_poisson_cross_solver Hereon-InstituteMS-openPASO-8bae1cf/src/tools/benchmark.py :182
knowledge Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :3571
discover Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :3647
examples Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :3834
submit_critic_review Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :4056
run_with_generator Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :4187
check_input Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :4396
run_simulation Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :4438
verify_pde_consistency Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :4844
verify_interface_flux Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :4863
audit_results Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :5076

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verify_mesh_independence Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :5120
coupled_solve Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :5351
couple Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :5452
couple_levels Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :6757
couple_precice Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :6934
visualize Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7084
developer Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7288
prepare_simulation Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7390
transfer_field Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7758
generate_mesh Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7855
reload_catalog Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7919
rediscover_backends Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :7987
setup_backend Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :8029
session_insights Hereon-InstituteMS-openPASO-8bae1cf/src/tools/consolidated.py :8097
transfer_field Hereon-InstituteMS-openPASO-8bae1cf/src/tools/coupling.py :1013
coupled_solve Hereon-InstituteMS-openPASO-8bae1cf/src/tools/coupling.py :1086
couple Hereon-InstituteMS-openPASO-8bae1cf/src/tools/coupling.py :1193
get_solver_architecture Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :231
list_solver_source_files Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :273
get_solver_capabilities_matrix Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :309
discover_sources Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :356
fetch_source Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :388
build_source Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :406
ensure_source Hereon-InstituteMS-openPASO-8bae1cf/src/tools/developer.py :429
list_solvers Hereon-InstituteMS-openPASO-8bae1cf/src/tools/discovery.py :12
get_solver_info Hereon-InstituteMS-openPASO-8bae1cf/src/tools/discovery.py :40
recommend_solver_for Hereon-InstituteMS-openPASO-8bae1cf/src/tools/discovery.py :74
get_example_inputs Hereon-InstituteMS-openPASO-8bae1cf/src/tools/examples_search.py :64

24 more not shown — this panel samples each group; the count above is the real total.

declared dependencies 9

sympy@*
fenics-dolfinx@>=0.8
gmsh@>=4.12
ngsolve@>=6.2
scikit-fem@>=10.0
KratosMultiphysics@>=10.0
dune-fem@>=2.10
mpi4py@>=3.0
pyprecice@>=3.0